Fugu rubripes Whole - Genome Shotgun Assembly and Analysis of the Genome
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, 1301 (2002); 297 Science et al. Samuel Aparicio Fugu rubripes Whole-Genome Shotgun Assembly and Analysis of the Genome of This copy is for your personal, non-commercial use only. clicking here. colleagues, clients, or customers by , you can order high-quality copies for your If you wish to distribute this article to others here. following the guidelines can be obtained by Permission to republish or repurpose articles or portions of articles ): December 1, 2013 www.sciencemag.org (this information is current as of The following resources related to this article are available online at http://www.sciencemag.org/content/297/5585/1301.full.html version of this article at: including high-resolution figures, can be found in the online Updated information and services, http://www.sciencemag.org/content/suppl/2002/07/30/1072104.DC2.html http://www.sciencemag.org/content/suppl/2002/08/22/1072104.DC1.html can be found at: Supporting Online Material http://www.sciencemag.org/content/297/5585/1301.full.html#ref-list-1 , 10 of which can be accessed free: cites 33 articles This article 767 article(s) on the ISI Web of Science cited by This article has been http://www.sciencemag.org/content/297/5585/1301.full.html#related-urls 100 articles hosted by HighWire Press; see: cited by This article has been http://www.sciencemag.org/cgi/collection/genetics Genetics subject collections: This article appears in the following
منابع مشابه
Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes.
The compact genome of Fugu rubripes has been sequenced to over 95% coverage, and more than 80% of the assembly is in multigene-sized scaffolds. In this 365-megabase vertebrate genome, repetitive DNA accounts for less than one-sixth of the sequence, and gene loci occupy about one-third of the genome. As with the human genome, gene loci are not evenly distributed, but are clustered into sparse an...
متن کاملGeneration and analysis of 25 Mb of genomic DNA from the pufferfish Fugu rubripes by sequence scanning.
We have generated and analyzed >50,000 shotgun clones from 1059 Fugu cosmid clones. All sequences have been minimally edited and searched against protein and DNA databases. These data are all displayed on a searchable, publicly available web site at. With an average of 50 reads per cosmid, this is virtually nonredundant sequence skimming, covering 30%-50% of each clone. This essentially random ...
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The compact genome of fugu (Takifugu rubripes) has been used widely as a reference genome for understanding the evolution of vertebrate genomes. However, the fragmented nature of the fugu genome assembly has restricted its use for comparisons of genome architecture in vertebrates. To extend the contiguity of the assembly to the chromosomal level, we have generated a comprehensive genetic map of...
متن کاملAnalysis of 148 kb of genomic DNA around the wnt1 locus of Fugu rubripes.
The analysis of the sequence of approximately 150 kb of a genomic region corresponding to the wnt1 gene of the Japanese pufferfish Fugu rubripes confirms the compact structure of the genome. Fifteen genes were found in this region, and 26.6% of the analyzed sequence is coding sequence. With an average intergenic distance of <5 kb, this gene density is comparable to that of Caenorhabditis elegan...
متن کاملG protein alpha subunit multigene family in the Japanese puffer fish Fugu rubripes: PCR from a compact vertebrate genome.
We compare the complexity and organization of the G protein alpha subunit multigene family in the vertebrate genomes of mammals and the Japanese puffer fish Fugu rubripes. Fourteen Fugu G alpha genes were identified of the 16 genes characterized previously in mammals, including Fugu genes from the four classes of alpha subunits Gs, Gi, Gq, and G12. Fugu and mammalian G alpha coding sequences ar...
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تاریخ انتشار 2013